Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Gm9022-201ENSMUST00000182482 992 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 Mir6958-201ENSMUST00000184207 73 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 AC154252.2-201ENSMUST00000223593 767 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm14460-201ENSMUST00000121511 639 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm8194-201ENSMUST00000159783 859 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm19287-201ENSMUST00000203190 358 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Gm270-201ENSMUST00000223010 976 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Ginm1-202ENSMUST00000065124 300 ntBASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna5Q2MKA5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm12196-201ENSMUST00000120954 262 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm43058-201ENSMUST00000197645 625 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna5Q2MKA5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna5Q2MKA5 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.97□□□□□ -0.01
Chrna5Q2MKA5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna5Q2MKA5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna5Q2MKA5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms