Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.72□□□□□ -0.53
Col10a1Q05306 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Gm18584-201ENSMUST00000203098 964 ntBASIC11.72□□□□□ -0.53
Col10a1Q05306 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.72□□□□□ -0.53
Col10a1Q05306 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col10a1Q05306 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.71□□□□□ -0.53
Col10a1Q05306 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm16379-201ENSMUST00000161469 348 ntBASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm8762-201ENSMUST00000193486 339 ntBASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm44487-201ENSMUST00000205145 325 ntBASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col10a1Q05306 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col10a1Q05306 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col10a1Q05306 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.71□□□□□ -0.54
Col10a1Q05306 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col10a1Q05306 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col10a1Q05306 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm22018-201ENSMUST00000104357 131 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm8738-201ENSMUST00000172606 329 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm19184-201ENSMUST00000196798 928 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col10a1Q05306 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.7□□□□□ -0.54
Col10a1Q05306 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col10a1Q05306 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col10a1Q05306 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.69□□□□□ -0.54
Col10a1Q05306 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms