Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm7467-201ENSMUST00000185173 652 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm28071-201ENSMUST00000190355 478 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm8285-201ENSMUST00000208293 759 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nkx2-3P97334 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-3P97334 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-3P97334 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-3P97334 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.83■□□□□ 0.12
Nkx2-3P97334 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.83■□□□□ 0.12
Nkx2-3P97334 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.83■□□□□ 0.12
Nkx2-3P97334 Ntng1-201ENSMUST00000051253 327 ntBASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm5455-201ENSMUST00000058710 715 ntBASIC15.83■□□□□ 0.12
Nkx2-3P97334 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-3P97334 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm9062-201ENSMUST00000117712 727 ntBASIC15.82■□□□□ 0.12
Nkx2-3P97334 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm43962-201ENSMUST00000203898 190 ntBASIC15.82■□□□□ 0.12
Nkx2-3P97334 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.82■□□□□ 0.12
Nkx2-3P97334 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.82■□□□□ 0.12
Nkx2-3P97334 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-3P97334 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms