Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17■□□□□ 0.31
Nphp4P59240 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Gm7722-201ENSMUST00000120646 741 ntBASIC17■□□□□ 0.31
Nphp4P59240 Gm11450-201ENSMUST00000121144 333 ntBASIC17■□□□□ 0.31
Nphp4P59240 Rprl1-201ENSMUST00000158050 327 ntBASIC17■□□□□ 0.31
Nphp4P59240 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Mir3547-201ENSMUST00000175461 88 ntBASIC17■□□□□ 0.31
Nphp4P59240 Gm8546-201ENSMUST00000178288 1264 ntBASIC17■□□□□ 0.31
Nphp4P59240 Gm43378-201ENSMUST00000199336 582 ntBASIC17■□□□□ 0.31
Nphp4P59240 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nphp4P59240 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Nphp4P59240 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC17■□□□□ 0.31
Nphp4P59240 Gm45779-201ENSMUST00000212189 4064 ntBASIC17■□□□□ 0.31
Nphp4P59240 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nphp4P59240 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nphp4P59240 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.99■□□□□ 0.31
Nphp4P59240 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.99■□□□□ 0.31
Nphp4P59240 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Gm28071-201ENSMUST00000190355 478 ntBASIC16.99■□□□□ 0.31
Nphp4P59240 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.99■□□□□ 0.31
Nphp4P59240 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.99■□□□□ 0.31
Nphp4P59240 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nphp4P59240 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.99■□□□□ 0.31
Nphp4P59240 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nphp4P59240 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.99■□□□□ 0.31
Nphp4P59240 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nphp4P59240 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Gm13035-201ENSMUST00000117496 342 ntBASIC16.98■□□□□ 0.31
Nphp4P59240 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.98■□□□□ 0.31
Nphp4P59240 Gm20426-201ENSMUST00000173657 440 ntBASIC16.98■□□□□ 0.31
Nphp4P59240 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.98■□□□□ 0.31
Nphp4P59240 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.98■□□□□ 0.31
Nphp4P59240 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nphp4P59240 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nphp4P59240 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nphp4P59240 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nphp4P59240 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nphp4P59240 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nphp4P59240 Gm11509-201ENSMUST00000117358 325 ntBASIC16.97■□□□□ 0.31
Nphp4P59240 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.97■□□□□ 0.31
Nphp4P59240 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.97■□□□□ 0.31
Nphp4P59240 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.97■□□□□ 0.31
Nphp4P59240 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.97■□□□□ 0.31
Nphp4P59240 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.97■□□□□ 0.31
Nphp4P59240 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.97■□□□□ 0.31
Nphp4P59240 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.97■□□□□ 0.31
Nphp4P59240 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.97■□□□□ 0.31
Nphp4P59240 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Nphp4P59240 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nphp4P59240 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms