Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.98□□□□□ -0.49
Nup43P59235 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup43P59235 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Gm38002-201ENSMUST00000193255 180 ntBASIC11.98□□□□□ -0.49
Nup43P59235 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup43P59235 Gm19309-201ENSMUST00000218295 205 ntBASIC11.98□□□□□ -0.49
Nup43P59235 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.98□□□□□ -0.49
Nup43P59235 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.98□□□□□ -0.49
Nup43P59235 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.98□□□□□ -0.49
Nup43P59235 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nup43P59235 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.98□□□□□ -0.49
Nup43P59235 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Nup43P59235 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup43P59235 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nup43P59235 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm13392-201ENSMUST00000117708 150 ntBASIC11.97□□□□□ -0.49
Nup43P59235 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm10478-201ENSMUST00000084451 396 ntBASIC11.97□□□□□ -0.49
Nup43P59235 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nup43P59235 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.97□□□□□ -0.49
Nup43P59235 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nup43P59235 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup43P59235 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nup43P59235 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Nup43P59235 Gm6023-201ENSMUST00000118217 606 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.96□□□□□ -0.49
Nup43P59235 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Gm24548-201ENSMUST00000158650 108 ntBASIC11.96□□□□□ -0.49
Nup43P59235 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Gm43133-201ENSMUST00000197472 463 ntBASIC11.96□□□□□ -0.49
Nup43P59235 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup43P59235 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup43P59235 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms