Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SmoP56726 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SmoP56726 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SmoP56726 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Rmrp-201ENSMUST00000157463 271 ntBASIC12.73□□□□□ -0.37
SmoP56726 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.73□□□□□ -0.37
SmoP56726 Gm31256-201ENSMUST00000194705 506 ntBASIC12.73□□□□□ -0.37
SmoP56726 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.73□□□□□ -0.37
SmoP56726 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.73□□□□□ -0.37
SmoP56726 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.73□□□□□ -0.37
SmoP56726 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.73□□□□□ -0.37
SmoP56726 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.73□□□□□ -0.37
SmoP56726 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.73□□□□□ -0.37
SmoP56726 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SmoP56726 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.72□□□□□ -0.37
SmoP56726 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SmoP56726 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.72□□□□□ -0.37
SmoP56726 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.72□□□□□ -0.37
SmoP56726 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm23270-201ENSMUST00000104055 131 ntBASIC12.72□□□□□ -0.37
SmoP56726 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SmoP56726 Gm12314-201ENSMUST00000118104 538 ntBASIC12.72□□□□□ -0.37
SmoP56726 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SmoP56726 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
SmoP56726 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm20482-202ENSMUST00000174729 825 ntBASIC12.72□□□□□ -0.37
SmoP56726 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.72□□□□□ -0.37
SmoP56726 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm39404-201ENSMUST00000216350 313 ntBASIC12.72□□□□□ -0.37
SmoP56726 Gm9257-201ENSMUST00000221254 232 ntBASIC12.72□□□□□ -0.37
SmoP56726 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.72□□□□□ -0.37
SmoP56726 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.72□□□□□ -0.37
SmoP56726 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.72□□□□□ -0.37
SmoP56726 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SmoP56726 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms