Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Usp5P56399 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Usp5P56399 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Usp5P56399 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp5P56399 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp5P56399 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Usp5P56399 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Usp5P56399 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp5P56399 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp5P56399 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp5P56399 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.78□□□□□ -0.04
Usp5P56399 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.78□□□□□ -0.04
Usp5P56399 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp5P56399 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp5P56399 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp5P56399 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Usp5P56399 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Usp5P56399 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.77□□□□□ -0.04
Usp5P56399 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Usp5P56399 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp5P56399 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Gm16296-201ENSMUST00000159905 325 ntBASIC14.77□□□□□ -0.05
Usp5P56399 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.77□□□□□ -0.05
Usp5P56399 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.77□□□□□ -0.05
Usp5P56399 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.77□□□□□ -0.05
Usp5P56399 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.77□□□□□ -0.05
Usp5P56399 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Usp5P56399 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.77□□□□□ -0.05
Usp5P56399 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.77□□□□□ -0.05
Usp5P56399 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Usp5P56399 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.77□□□□□ -0.05
Usp5P56399 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp5P56399 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Usp5P56399 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.76□□□□□ -0.05
Usp5P56399 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Usp5P56399 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp5P56399 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms