Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hnf4aP49698 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hnf4aP49698 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hnf4aP49698 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Cog3-203ENSMUST00000227473 4197 ntBASIC12.29□□□□□ -0.44
Hnf4aP49698 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Hnf4aP49698 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hnf4aP49698 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.29□□□□□ -0.44
Hnf4aP49698 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gm7561-201ENSMUST00000211203 886 ntBASIC12.29□□□□□ -0.44
Hnf4aP49698 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gm6091-201ENSMUST00000098307 165 ntBASIC12.29□□□□□ -0.44
Hnf4aP49698 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.29□□□□□ -0.44
Hnf4aP49698 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hnf4aP49698 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hnf4aP49698 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.28□□□□□ -0.44
Hnf4aP49698 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.28□□□□□ -0.44
Hnf4aP49698 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Hnf4aP49698 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hnf4aP49698 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.27□□□□□ -0.44
Hnf4aP49698 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hnf4aP49698 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hnf4aP49698 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hnf4aP49698 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hnf4aP49698 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.27□□□□□ -0.44
Hnf4aP49698 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hnf4aP49698 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hnf4aP49698 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hnf4aP49698 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hnf4aP49698 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hnf4aP49698 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms