Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox2P48432 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox2P48432 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox2P48432 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.86□□□□□ -0.51
Sox2P48432 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.86□□□□□ -0.51
Sox2P48432 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox2P48432 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox2P48432 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox2P48432 Gm44069-201ENSMUST00000204898 506 ntBASIC11.86□□□□□ -0.51
Sox2P48432 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.86□□□□□ -0.51
Sox2P48432 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox2P48432 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox2P48432 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox2P48432 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox2P48432 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Gm22189-201ENSMUST00000103822 86 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Gm15371-201ENSMUST00000117057 784 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Gm15321-201ENSMUST00000121290 288 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Gm14719-201ENSMUST00000121891 340 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox2P48432 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Map1b-203ENSMUST00000223725 2669 ntBASIC11.85□□□□□ -0.51
Sox2P48432 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox2P48432 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox2P48432 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms