Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mir7070-201ENSMUST00000183657 86 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 AA914427-201ENSMUST00000193194 1166 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-6P43688 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.01□□□□□ -0.49
Nkx2-6P43688 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Nkx2-6P43688 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-6P43688 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Gm15547-201ENSMUST00000122152 333 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-6P43688 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Gm45186-201ENSMUST00000206874 478 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm18212-201ENSMUST00000211678 889 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm45925-201ENSMUST00000218882 744 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm22058-201ENSMUST00000083393 310 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nkx2-6P43688 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Gm9025-201ENSMUST00000122415 1575 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12□□□□□ -0.49
Nkx2-6P43688 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12□□□□□ -0.49
Nkx2-6P43688 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-6P43688 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-6P43688 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-6P43688 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.99□□□□□ -0.49
Nkx2-6P43688 Gm13736-201ENSMUST00000119272 253 ntBASIC11.99□□□□□ -0.49
Nkx2-6P43688 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms