Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Msh2P43247 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.08□□□□□ -0.32
Msh2P43247 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Msh2P43247 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Msh2P43247 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Msh2P43247 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.07□□□□□ -0.32
Msh2P43247 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gm6447-201ENSMUST00000118905 835 ntBASIC13.07□□□□□ -0.32
Msh2P43247 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.07□□□□□ -0.32
Msh2P43247 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.07□□□□□ -0.32
Msh2P43247 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Msh2P43247 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Msh2P43247 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Msh2P43247 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.07□□□□□ -0.32
Msh2P43247 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msh2P43247 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.06□□□□□ -0.32
Msh2P43247 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.06□□□□□ -0.32
Msh2P43247 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.06□□□□□ -0.32
Msh2P43247 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.06□□□□□ -0.32
Msh2P43247 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Gm27390-201ENSMUST00000184516 176 ntBASIC13.06□□□□□ -0.32
Msh2P43247 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.06□□□□□ -0.32
Msh2P43247 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Msh2P43247 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Msh2P43247 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.06□□□□□ -0.32
Msh2P43247 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Msh2P43247 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Msh2P43247 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Msh2P43247 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Msh2P43247 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msh2P43247 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.05□□□□□ -0.32
Msh2P43247 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.05□□□□□ -0.32
Msh2P43247 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Msh2P43247 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Msh2P43247 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms