Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm44124-201ENSMUST00000204159 472 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm25857-201ENSMUST00000082788 129 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm22058-201ENSMUST00000083393 310 ntBASIC11.61□□□□□ -0.55
Nkx2-2P42586 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Nkx2-2P42586 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.6□□□□□ -0.55
Nkx2-2P42586 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Gm22018-201ENSMUST00000104357 131 ntBASIC11.6□□□□□ -0.55
Nkx2-2P42586 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Gm37008-201ENSMUST00000195712 319 ntBASIC11.6□□□□□ -0.55
Nkx2-2P42586 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.6□□□□□ -0.55
Nkx2-2P42586 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.6□□□□□ -0.55
Nkx2-2P42586 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-2P42586 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms