Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm2495-201ENSMUST00000191160 466 ntBASIC11.93□□□□□ -0.5
Sox6P40645 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox6P40645 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Gm5356-201ENSMUST00000093326 615 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.92□□□□□ -0.5
Sox6P40645 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.92□□□□□ -0.5
Sox6P40645 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm15806-201ENSMUST00000120696 955 ntBASIC11.92□□□□□ -0.5
Sox6P40645 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox6P40645 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.92□□□□□ -0.5
Sox6P40645 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm17794-201ENSMUST00000220252 955 ntBASIC11.92□□□□□ -0.5
Sox6P40645 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.92□□□□□ -0.5
Sox6P40645 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Sox6P40645 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox6P40645 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox6P40645 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Sox6P40645 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox6P40645 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.92□□□□□ -0.5
Sox6P40645 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Sox6P40645 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Sox6P40645 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox6P40645 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sox6P40645 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.91□□□□□ -0.5
Sox6P40645 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.91□□□□□ -0.5
Sox6P40645 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.91□□□□□ -0.5
Sox6P40645 Gm6152-201ENSMUST00000151704 340 ntBASIC11.91□□□□□ -0.5
Sox6P40645 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Gm38671-201ENSMUST00000200573 130 ntBASIC11.91□□□□□ -0.5
Sox6P40645 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Gm8463-201ENSMUST00000208573 613 ntBASIC11.91□□□□□ -0.5
Sox6P40645 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Gm18473-201ENSMUST00000220543 868 ntBASIC11.91□□□□□ -0.5
Sox6P40645 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.91□□□□□ -0.5
Sox6P40645 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox6P40645 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.91□□□□□ -0.5
Sox6P40645 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Sox6P40645 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.91□□□□□ -0.5
Sox6P40645 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms