Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Gm2420-202ENSMUST00000202224 2249 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gm12623-201ENSMUST00000119849 1983 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm14585-201ENSMUST00000120713 634 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm4726-201ENSMUST00000135604 736 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm6019-201ENSMUST00000148369 736 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm3793-201ENSMUST00000204973 672 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cxcl12P40224 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.99□□□□□ -0.33
Cxcl12P40224 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.99□□□□□ -0.33
Cxcl12P40224 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cxcl12P40224 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Mir7076-201ENSMUST00000183519 74 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Gm19994-201ENSMUST00000217086 586 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 Gm6867-201ENSMUST00000219165 425 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.98□□□□□ -0.33
Cxcl12P40224 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cxcl12P40224 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cxcl12P40224 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms