Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Timp3P39876 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Timp3P39876 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Timp3P39876 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Timp3P39876 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Timp3P39876 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.42□□□□□ -0.74
Timp3P39876 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Timp3P39876 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Gm12241-201ENSMUST00000118330 726 ntBASIC10.42□□□□□ -0.74
Timp3P39876 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Timp3P39876 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.42□□□□□ -0.74
Timp3P39876 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Gm29396-201ENSMUST00000185659 716 ntBASIC10.42□□□□□ -0.74
Timp3P39876 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.42□□□□□ -0.74
Timp3P39876 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Gm9368-201ENSMUST00000219348 831 ntBASIC10.42□□□□□ -0.74
Timp3P39876 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Timp3P39876 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Timp3P39876 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Timp3P39876 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Timp3P39876 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Timp3P39876 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Mir874-201ENSMUST00000104769 76 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gm13342-201ENSMUST00000121055 207 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Gm11978-201ENSMUST00000122315 466 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Timp3P39876 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.41□□□□□ -0.74
Timp3P39876 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.41□□□□□ -0.74
Timp3P39876 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.41□□□□□ -0.74
Timp3P39876 Olfr284-202ENSMUST00000206647 966 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Gm6458-201ENSMUST00000211573 635 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.41□□□□□ -0.74
Timp3P39876 Gm5781-201ENSMUST00000219792 443 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms