Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.52□□□□□ -0.08
Vcam1P29533 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Gm24934-201ENSMUST00000103764 111 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vcam1P29533 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.52□□□□□ -0.09
Vcam1P29533 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Gm12176-201ENSMUST00000121420 875 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Gm5616-201ENSMUST00000165252 384 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Gm8741-201ENSMUST00000174736 384 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Gm44958-201ENSMUST00000203734 736 ntBASIC14.52□□□□□ -0.09
Vcam1P29533 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.52□□□□□ -0.09
Vcam1P29533 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Vcam1P29533 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vcam1P29533 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcam1P29533 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Vcam1P29533 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.51□□□□□ -0.09
Vcam1P29533 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.51□□□□□ -0.09
Vcam1P29533 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.51□□□□□ -0.09
Vcam1P29533 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Gm17040-202ENSMUST00000170597 889 ntBASIC14.51□□□□□ -0.09
Vcam1P29533 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.51□□□□□ -0.09
Vcam1P29533 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vcam1P29533 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.51□□□□□ -0.09
Vcam1P29533 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Vcam1P29533 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcam1P29533 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.5□□□□□ -0.09
Vcam1P29533 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vcam1P29533 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vcam1P29533 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Vcam1P29533 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.5□□□□□ -0.09
Vcam1P29533 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.5□□□□□ -0.09
Vcam1P29533 Mir3547-201ENSMUST00000175461 88 ntBASIC14.5□□□□□ -0.09
Vcam1P29533 AY036118-201ENSMUST00000200021 923 ntBASIC14.5□□□□□ -0.09
Vcam1P29533 AU022133-201ENSMUST00000200601 873 ntBASIC14.5□□□□□ -0.09
Vcam1P29533 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.5□□□□□ -0.09
Vcam1P29533 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vcam1P29533 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcam1P29533 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Vcam1P29533 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms