Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm6963-201ENSMUST00000147879 379 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm5070-201ENSMUST00000177599 862 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm42937-201ENSMUST00000197360 752 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Rprl1-202ENSMUST00000198476 238 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Mmp3P28862 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.55□□□□□ -0.24
Mmp3P28862 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Mmp3P28862 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Mmp3P28862 Gm12015-201ENSMUST00000117065 843 ntBASIC13.54□□□□□ -0.24
Mmp3P28862 Gm13296-201ENSMUST00000117854 997 ntBASIC13.54□□□□□ -0.24
Mmp3P28862 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.54□□□□□ -0.24
Mmp3P28862 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.54□□□□□ -0.24
Mmp3P28862 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Mmp3P28862 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Mmp3P28862 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mmp3P28862 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.53□□□□□ -0.24
Mmp3P28862 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Mmp3P28862 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm13996-201ENSMUST00000118456 430 ntBASIC13.53□□□□□ -0.24
Mmp3P28862 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.53□□□□□ -0.24
Mmp3P28862 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.53□□□□□ -0.24
Mmp3P28862 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Mmp3P28862 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mmp3P28862 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.52□□□□□ -0.24
Mmp3P28862 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.52□□□□□ -0.24
Mmp3P28862 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Mmp3P28862 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms