Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RxrbP28704 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.74□□□□□ -0.37
RxrbP28704 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RxrbP28704 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RxrbP28704 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.73□□□□□ -0.37
RxrbP28704 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Gm14057-201ENSMUST00000120631 482 ntBASIC12.73□□□□□ -0.37
RxrbP28704 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.73□□□□□ -0.37
RxrbP28704 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.73□□□□□ -0.37
RxrbP28704 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.73□□□□□ -0.37
RxrbP28704 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.73□□□□□ -0.37
RxrbP28704 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.73□□□□□ -0.37
RxrbP28704 Gm26315-201ENSMUST00000083890 321 ntBASIC12.73□□□□□ -0.37
RxrbP28704 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
RxrbP28704 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RxrbP28704 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RxrbP28704 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.73□□□□□ -0.37
RxrbP28704 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.72□□□□□ -0.37
RxrbP28704 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.72□□□□□ -0.37
RxrbP28704 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.72□□□□□ -0.37
RxrbP28704 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RxrbP28704 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.72□□□□□ -0.37
RxrbP28704 Gm42612-201ENSMUST00000197986 623 ntBASIC12.72□□□□□ -0.37
RxrbP28704 Gm43170-201ENSMUST00000199827 612 ntBASIC12.72□□□□□ -0.37
RxrbP28704 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.72□□□□□ -0.37
RxrbP28704 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RxrbP28704 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RxrbP28704 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RxrbP28704 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
RxrbP28704 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms