Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm21811-201ENSMUST00000096485 930 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Col2a1P28481 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Gm14058-201ENSMUST00000116082 735 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 Gm12501-201ENSMUST00000119163 529 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 Gm5419-201ENSMUST00000119301 527 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.19□□□□□ -0.14
Col2a1P28481 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.19□□□□□ -0.14
Col2a1P28481 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Gm4157-201ENSMUST00000211647 679 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 Gm8959-201ENSMUST00000213150 571 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.19□□□□□ -0.14
Col2a1P28481 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col2a1P28481 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.19□□□□□ -0.14
Col2a1P28481 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col2a1P28481 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col2a1P28481 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.18□□□□□ -0.14
Col2a1P28481 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm27530-201ENSMUST00000184096 98 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Gm4034-201ENSMUST00000187674 480 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm8956-201ENSMUST00000203939 825 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col2a1P28481 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col2a1P28481 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Col2a1P28481 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm14724-201ENSMUST00000118400 537 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.18□□□□□ -0.14
Col2a1P28481 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.18□□□□□ -0.14
Col2a1P28481 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.18□□□□□ -0.14
Col2a1P28481 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col2a1P28481 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.17□□□□□ -0.14
Col2a1P28481 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.17□□□□□ -0.14
Col2a1P28481 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms