Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H2afxP27661 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H2afxP27661 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.2□□□□□ -0.3
H2afxP27661 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.2□□□□□ -0.3
H2afxP27661 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
H2afxP27661 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afxP27661 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.2□□□□□ -0.3
H2afxP27661 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afxP27661 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H2afxP27661 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.2□□□□□ -0.3
H2afxP27661 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H2afxP27661 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.2□□□□□ -0.3
H2afxP27661 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afxP27661 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.19□□□□□ -0.3
H2afxP27661 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afxP27661 Gm9727-201ENSMUST00000161387 555 ntBASIC13.19□□□□□ -0.3
H2afxP27661 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Psmb5-202ENSMUST00000227257 622 ntBASIC13.19□□□□□ -0.3
H2afxP27661 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.19□□□□□ -0.3
H2afxP27661 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
H2afxP27661 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.19□□□□□ -0.3
H2afxP27661 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afxP27661 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
H2afxP27661 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.18□□□□□ -0.3
H2afxP27661 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.18□□□□□ -0.3
H2afxP27661 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.18□□□□□ -0.3
H2afxP27661 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.18□□□□□ -0.3
H2afxP27661 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
H2afxP27661 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afxP27661 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afxP27661 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afxP27661 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms