Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm13736-201ENSMUST00000119272 253 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm11597-201ENSMUST00000121423 964 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm44405-201ENSMUST00000198952 126 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm3961-201ENSMUST00000204425 994 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm5904-201ENSMUST00000210286 865 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Gm6082-201ENSMUST00000215204 454 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Col8a2P25318 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Col8a2P25318 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Col8a2P25318 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.58□□□□□ -0.72
Col8a2P25318 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col8a2P25318 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.57□□□□□ -0.72
Col8a2P25318 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.57□□□□□ -0.72
Col8a2P25318 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm39404-201ENSMUST00000216350 313 ntBASIC10.57□□□□□ -0.72
Col8a2P25318 Gm9257-201ENSMUST00000221254 232 ntBASIC10.57□□□□□ -0.72
Col8a2P25318 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.57□□□□□ -0.72
Col8a2P25318 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.57□□□□□ -0.72
Col8a2P25318 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col8a2P25318 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col8a2P25318 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a2P25318 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a2P25318 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col8a2P25318 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Col8a2P25318 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.56□□□□□ -0.72
Col8a2P25318 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Gm25043-201ENSMUST00000158604 212 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Gm18056-201ENSMUST00000207670 568 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Gm18061-201ENSMUST00000208350 562 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Gm18063-201ENSMUST00000208529 568 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Gm18052-201ENSMUST00000208750 559 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.56□□□□□ -0.72
Col8a2P25318 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms