Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
Tnfrsf1bP25119 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm9899-201ENSMUST00000065519 555 ntBASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf1bP25119 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm16296-201ENSMUST00000159905 325 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm42627-201ENSMUST00000197347 224 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm6013-201ENSMUST00000212264 699 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf1bP25119 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms