Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Clk1P22518 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.9□□□□□ -0.5
Clk1P22518 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Gm24196-201ENSMUST00000179161 110 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.9□□□□□ -0.5
Clk1P22518 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clk1P22518 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.9□□□□□ -0.5
Clk1P22518 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clk1P22518 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clk1P22518 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.89□□□□□ -0.51
Clk1P22518 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clk1P22518 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clk1P22518 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Gm11618-201ENSMUST00000117946 267 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Clk1P22518 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.89□□□□□ -0.51
Clk1P22518 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.89□□□□□ -0.51
Clk1P22518 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clk1P22518 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.89□□□□□ -0.51
Clk1P22518 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clk1P22518 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clk1P22518 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms