Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nid1P10493 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Nid1P10493 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.88□□□□□ -0.51
Nid1P10493 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.87□□□□□ -0.51
Nid1P10493 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.87□□□□□ -0.51
Nid1P10493 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Gm24231-201ENSMUST00000104315 133 ntBASIC11.87□□□□□ -0.51
Nid1P10493 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.87□□□□□ -0.51
Nid1P10493 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.87□□□□□ -0.51
Nid1P10493 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.87□□□□□ -0.51
Nid1P10493 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Gm29649-201ENSMUST00000185649 419 ntBASIC11.87□□□□□ -0.51
Nid1P10493 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nid1P10493 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nid1P10493 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nid1P10493 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Daam2-202ENSMUST00000224595 1926 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.86□□□□□ -0.51
Nid1P10493 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Gm27839-201ENSMUST00000184242 106 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Gm27390-201ENSMUST00000184516 176 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.86□□□□□ -0.51
Nid1P10493 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.86□□□□□ -0.51
Nid1P10493 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nid1P10493 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.86□□□□□ -0.51
Nid1P10493 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms