Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.71□□□□□ -0.21
Vti1aO89116 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.71□□□□□ -0.21
Vti1aO89116 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Vti1aO89116 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.71□□□□□ -0.21
Vti1aO89116 Gm31256-201ENSMUST00000194705 506 ntBASIC13.71□□□□□ -0.21
Vti1aO89116 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.71□□□□□ -0.21
Vti1aO89116 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.71□□□□□ -0.21
Vti1aO89116 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.71□□□□□ -0.21
Vti1aO89116 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.71□□□□□ -0.21
Vti1aO89116 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Vti1aO89116 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1aO89116 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Vti1aO89116 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1aO89116 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1aO89116 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1aO89116 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.71□□□□□ -0.22
Vti1aO89116 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.7□□□□□ -0.22
Vti1aO89116 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.7□□□□□ -0.22
Vti1aO89116 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.7□□□□□ -0.22
Vti1aO89116 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.7□□□□□ -0.22
Vti1aO89116 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.7□□□□□ -0.22
Vti1aO89116 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.7□□□□□ -0.22
Vti1aO89116 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.7□□□□□ -0.22
Vti1aO89116 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vti1aO89116 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.7□□□□□ -0.22
Vti1aO89116 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.7□□□□□ -0.22
Vti1aO89116 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1aO89116 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Vti1aO89116 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vti1aO89116 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Vti1aO89116 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Gm14726-201ENSMUST00000120623 896 ntBASIC13.69□□□□□ -0.22
Vti1aO89116 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.69□□□□□ -0.22
Vti1aO89116 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Gm13316-201ENSMUST00000140537 691 ntBASIC13.69□□□□□ -0.22
Vti1aO89116 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1aO89116 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vti1aO89116 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1aO89116 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.69□□□□□ -0.22
Vti1aO89116 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1aO89116 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.69□□□□□ -0.22
Vti1aO89116 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vti1aO89116 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vti1aO89116 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms