Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
ClppO88696 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.46□□□□□ -0.41
ClppO88696 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Gm44364-201ENSMUST00000198368 141 ntBASIC12.46□□□□□ -0.41
ClppO88696 Gm43822-201ENSMUST00000200285 476 ntBASIC12.46□□□□□ -0.41
ClppO88696 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.46□□□□□ -0.41
ClppO88696 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ClppO88696 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClppO88696 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.45□□□□□ -0.42
ClppO88696 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ClppO88696 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ClppO88696 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Gm18935-201ENSMUST00000212692 664 ntBASIC12.45□□□□□ -0.42
ClppO88696 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.45□□□□□ -0.42
ClppO88696 Gm9823-201ENSMUST00000051212 327 ntBASIC12.45□□□□□ -0.42
ClppO88696 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ClppO88696 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ClppO88696 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ClppO88696 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ClppO88696 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClppO88696 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.44□□□□□ -0.42
ClppO88696 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ClppO88696 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.44□□□□□ -0.42
ClppO88696 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ClppO88696 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.44□□□□□ -0.42
ClppO88696 Gm12241-201ENSMUST00000118330 726 ntBASIC12.44□□□□□ -0.42
ClppO88696 Gm13342-201ENSMUST00000121055 207 ntBASIC12.44□□□□□ -0.42
ClppO88696 Gm26185-201ENSMUST00000157692 266 ntBASIC12.44□□□□□ -0.42
ClppO88696 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Olfr284-202ENSMUST00000206647 966 ntBASIC12.44□□□□□ -0.42
ClppO88696 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.44□□□□□ -0.42
ClppO88696 Gm9368-201ENSMUST00000219348 831 ntBASIC12.44□□□□□ -0.42
ClppO88696 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ClppO88696 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ClppO88696 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.44□□□□□ -0.42
ClppO88696 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.44□□□□□ -0.42
ClppO88696 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClppO88696 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms