Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm10012-201ENSMUST00000078252 192 ntBASIC12.82□□□□□ -0.36
ChkaO54804 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
ChkaO54804 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
ChkaO54804 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ChkaO54804 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ChkaO54804 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ChkaO54804 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.81□□□□□ -0.36
ChkaO54804 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.81□□□□□ -0.36
ChkaO54804 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.81□□□□□ -0.36
ChkaO54804 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ChkaO54804 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.81□□□□□ -0.36
ChkaO54804 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ChkaO54804 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Gm14921-201ENSMUST00000118643 908 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Gm26185-201ENSMUST00000157692 266 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Gm23363-201ENSMUST00000175024 79 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Gm8652-201ENSMUST00000181363 964 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.81□□□□□ -0.36
ChkaO54804 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.81□□□□□ -0.36
ChkaO54804 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.81□□□□□ -0.36
ChkaO54804 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.81□□□□□ -0.36
ChkaO54804 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Gm7653-201ENSMUST00000214567 508 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.81□□□□□ -0.36
ChkaO54804 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ChkaO54804 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
ChkaO54804 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.81□□□□□ -0.36
ChkaO54804 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
ChkaO54804 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ChkaO54804 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.81□□□□□ -0.36
ChkaO54804 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ChkaO54804 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.8□□□□□ -0.36
ChkaO54804 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ChkaO54804 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.8□□□□□ -0.36
ChkaO54804 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
ChkaO54804 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
ChkaO54804 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ChkaO54804 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.8□□□□□ -0.36
ChkaO54804 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.8□□□□□ -0.36
ChkaO54804 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.8□□□□□ -0.36
ChkaO54804 Gm24196-201ENSMUST00000179161 110 ntBASIC12.8□□□□□ -0.36
ChkaO54804 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.8□□□□□ -0.36
ChkaO54804 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.8□□□□□ -0.36
ChkaO54804 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ChkaO54804 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms