Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ube3aO08759 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube3aO08759 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ube3aO08759 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Paupar-201ENSMUST00000194826 3482 ntBASIC13.71□□□□□ -0.21
Ube3aO08759 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Gm13689-201ENSMUST00000119360 685 ntBASIC13.71□□□□□ -0.21
Ube3aO08759 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.71□□□□□ -0.21
Ube3aO08759 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.71□□□□□ -0.21
Ube3aO08759 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ube3aO08759 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3aO08759 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.71□□□□□ -0.22
Ube3aO08759 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3aO08759 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ube3aO08759 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Rubie-203ENSMUST00000227803 2430 ntBASIC13.7□□□□□ -0.22
Ube3aO08759 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.7□□□□□ -0.22
Ube3aO08759 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.7□□□□□ -0.22
Ube3aO08759 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.7□□□□□ -0.22
Ube3aO08759 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ube3aO08759 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.7□□□□□ -0.22
Ube3aO08759 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Itm2b-204ENSMUST00000228637 783 ntBASIC13.7□□□□□ -0.22
Ube3aO08759 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ube3aO08759 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.7□□□□□ -0.22
Ube3aO08759 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3aO08759 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ube3aO08759 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.69□□□□□ -0.22
Ube3aO08759 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.69□□□□□ -0.22
Ube3aO08759 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.69□□□□□ -0.22
Ube3aO08759 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3aO08759 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.69□□□□□ -0.22
Ube3aO08759 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms