Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.25■□□□□ 0.03
NpcdF8VQB8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.25■□□□□ 0.03
NpcdF8VQB8 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NpcdF8VQB8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Gm14058-201ENSMUST00000116082 735 ntBASIC15.24■□□□□ 0.03
NpcdF8VQB8 Gm15515-201ENSMUST00000117827 822 ntBASIC15.24■□□□□ 0.03
NpcdF8VQB8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.24■□□□□ 0.03
NpcdF8VQB8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NpcdF8VQB8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.23■□□□□ 0.03
NpcdF8VQB8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Gm5616-201ENSMUST00000165252 384 ntBASIC15.23■□□□□ 0.03
NpcdF8VQB8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Gm8741-201ENSMUST00000174736 384 ntBASIC15.23■□□□□ 0.03
NpcdF8VQB8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.23■□□□□ 0.03
NpcdF8VQB8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.23■□□□□ 0.03
NpcdF8VQB8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NpcdF8VQB8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms