Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh17E9PXF0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh17E9PXF0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Pcdh17E9PXF0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Pcdh17E9PXF0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm44487-201ENSMUST00000205145 325 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm30285-201ENSMUST00000214614 422 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh17E9PXF0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm14726-201ENSMUST00000120623 896 ntBASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh17E9PXF0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms