Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm4995-201ENSMUST00000117247 432 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm5264-201ENSMUST00000190584 848 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm26315-201ENSMUST00000083890 321 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm15376-201ENSMUST00000122258 783 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm27321-201ENSMUST00000185021 205 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm43094-201ENSMUST00000196549 921 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm12887B1AVM1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms