Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Gm11450-201ENSMUST00000121144 333 ntBASIC10.7□□□□□ -0.7
Col6a4A2AX52 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Mir6958-201ENSMUST00000184207 73 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm12058-201ENSMUST00000118614 437 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm5369-201ENSMUST00000217499 588 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.69□□□□□ -0.7
Col6a4A2AX52 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Col6a4A2AX52 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms