Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm4900-201ENSMUST00000222046 1628 ntBASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm11663-201ENSMUST00000117888 290 ntBASIC6.5□□□□□ -1.37
Ubr4A2AN08 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ubr4A2AN08 Gm26286-201ENSMUST00000104166 134 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Zfp389-202ENSMUST00000224437 1234 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm34379-201ENSMUST00000195036 290 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm6423-201ENSMUST00000204315 934 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 AC163038.2-201ENSMUST00000224851 650 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm6992-201ENSMUST00000217973 1607 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm22344-201ENSMUST00000122642 278 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Mir1905-201ENSMUST00000122779 82 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm7082-201ENSMUST00000209880 969 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ubr4A2AN08 Gm45133-201ENSMUST00000207548 2773 ntBASIC6.49□□□□□ -1.37
Ubr4A2AN08 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ubr4A2AN08 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ubr4A2AN08 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Ubr4A2AN08 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ubr4A2AN08 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC6.48□□□□□ -1.37
Ubr4A2AN08 Gm36980-201ENSMUST00000195643 622 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms