Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav12d-1A0N8R0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm15429-201ENSMUST00000151268 798 ntBASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Mir6956-201ENSMUST00000183598 62 ntBASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Mir7654-201ENSMUST00000185082 70 ntBASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm42599-201ENSMUST00000201308 469 ntBASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav12d-1A0N8R0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms