Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcb1Q9Z0H3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smarcb1Q9Z0H3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcb1Q9Z0H3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcb1Q9Z0H3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.89■■□□□ 1.09
Smarcb1Q9Z0H3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcb1Q9Z0H3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarcb1Q9Z0H3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Smarcb1Q9Z0H3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.87■■□□□ 1.09
Smarcb1Q9Z0H3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarcb1Q9Z0H3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarcb1Q9Z0H3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcb1Q9Z0H3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcb1Q9Z0H3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.86■■□□□ 1.09
Smarcb1Q9Z0H3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Gm21956-201ENSMUST00000179946 522 ntBASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Gm9870-201ENSMUST00000063874 645 ntBASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcb1Q9Z0H3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smarcb1Q9Z0H3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.84■■□□□ 1.09
Smarcb1Q9Z0H3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcb1Q9Z0H3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.84■■□□□ 1.09
Smarcb1Q9Z0H3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcb1Q9Z0H3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.83■■□□□ 1.09
Smarcb1Q9Z0H3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Smarcb1Q9Z0H3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Smarcb1Q9Z0H3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcb1Q9Z0H3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcb1Q9Z0H3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Smarcb1Q9Z0H3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms