Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col13a1Q9R1N9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col13a1Q9R1N9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.82■□□□□ 0.44
Col13a1Q9R1N9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col13a1Q9R1N9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.8■□□□□ 0.44
Col13a1Q9R1N9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col13a1Q9R1N9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col13a1Q9R1N9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col13a1Q9R1N9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Gm6139-201ENSMUST00000079261 882 ntBASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.76■□□□□ 0.43
Col13a1Q9R1N9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col13a1Q9R1N9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms