Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clcn2Q9R0A1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clcn2Q9R0A1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clcn2Q9R0A1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clcn2Q9R0A1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clcn2Q9R0A1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Gm5921-201ENSMUST00000075898 882 ntBASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.43■■□□□ 1.02
Clcn2Q9R0A1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.42■■□□□ 1.02
Clcn2Q9R0A1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.41■■□□□ 1.02
Clcn2Q9R0A1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn2Q9R0A1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn2Q9R0A1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn2Q9R0A1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn2Q9R0A1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clcn2Q9R0A1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Clcn2Q9R0A1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Clcn2Q9R0A1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.37■■□□□ 1.01
Clcn2Q9R0A1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn2Q9R0A1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn2Q9R0A1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn2Q9R0A1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn2Q9R0A1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn2Q9R0A1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Clcn2Q9R0A1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Clcn2Q9R0A1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn2Q9R0A1 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.33■■□□□ 1.01
Clcn2Q9R0A1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Clcn2Q9R0A1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Clcn2Q9R0A1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Clcn2Q9R0A1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Gm13238-201ENSMUST00000117655 780 ntBASIC21.32■■□□□ 1
Clcn2Q9R0A1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn2Q9R0A1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.31■■□□□ 1
Clcn2Q9R0A1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Clcn2Q9R0A1 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.31■■□□□ 1
Clcn2Q9R0A1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn2Q9R0A1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.31■■□□□ 1
Clcn2Q9R0A1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn2Q9R0A1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn2Q9R0A1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.3■■□□□ 1
Clcn2Q9R0A1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms