Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clca3a1Q9QX15 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3a1Q9QX15 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3a1Q9QX15 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3a1Q9QX15 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3a1Q9QX15 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3a1Q9QX15 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Clca3a1Q9QX15 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.73■□□□□ 0.75
Clca3a1Q9QX15 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3a1Q9QX15 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Clca3a1Q9QX15 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3a1Q9QX15 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3a1Q9QX15 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3a1Q9QX15 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3a1Q9QX15 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3a1Q9QX15 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3a1Q9QX15 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3a1Q9QX15 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3a1Q9QX15 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clca3a1Q9QX15 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3a1Q9QX15 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3a1Q9QX15 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3a1Q9QX15 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3a1Q9QX15 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Clca3a1Q9QX15 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
Clca3a1Q9QX15 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.65■□□□□ 0.74
Clca3a1Q9QX15 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3a1Q9QX15 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
Clca3a1Q9QX15 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clca3a1Q9QX15 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clca3a1Q9QX15 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.64■□□□□ 0.73
Clca3a1Q9QX15 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clca3a1Q9QX15 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms