Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prg4Q9JM99 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prg4Q9JM99 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Prg4Q9JM99 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prg4Q9JM99 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prg4Q9JM99 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.24■□□□□ 0.67
Prg4Q9JM99 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prg4Q9JM99 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prg4Q9JM99 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prg4Q9JM99 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prg4Q9JM99 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prg4Q9JM99 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.21■□□□□ 0.67
Prg4Q9JM99 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prg4Q9JM99 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prg4Q9JM99 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prg4Q9JM99 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Prg4Q9JM99 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prg4Q9JM99 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prg4Q9JM99 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prg4Q9JM99 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prg4Q9JM99 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prg4Q9JM99 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Prg4Q9JM99 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prg4Q9JM99 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prg4Q9JM99 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prg4Q9JM99 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prg4Q9JM99 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prg4Q9JM99 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Prg4Q9JM99 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.16■□□□□ 0.66
Prg4Q9JM99 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prg4Q9JM99 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prg4Q9JM99 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prg4Q9JM99 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prg4Q9JM99 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prg4Q9JM99 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms