Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SrfQ9JM73 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SrfQ9JM73 Gm43137-201ENSMUST00000198052 594 ntBASIC20.1■□□□□ 0.81
SrfQ9JM73 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SrfQ9JM73 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.1■□□□□ 0.81
SrfQ9JM73 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SrfQ9JM73 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
SrfQ9JM73 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SrfQ9JM73 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SrfQ9JM73 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.09■□□□□ 0.81
SrfQ9JM73 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.09■□□□□ 0.81
SrfQ9JM73 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SrfQ9JM73 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.09■□□□□ 0.81
SrfQ9JM73 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SrfQ9JM73 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
SrfQ9JM73 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SrfQ9JM73 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SrfQ9JM73 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SrfQ9JM73 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SrfQ9JM73 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SrfQ9JM73 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SrfQ9JM73 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SrfQ9JM73 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.07■□□□□ 0.8
SrfQ9JM73 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SrfQ9JM73 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SrfQ9JM73 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SrfQ9JM73 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.06■□□□□ 0.8
SrfQ9JM73 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.06■□□□□ 0.8
SrfQ9JM73 Mir7075-201ENSMUST00000184187 82 ntBASIC20.06■□□□□ 0.8
SrfQ9JM73 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.06■□□□□ 0.8
SrfQ9JM73 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SrfQ9JM73 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SrfQ9JM73 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SrfQ9JM73 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.05■□□□□ 0.8
SrfQ9JM73 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
SrfQ9JM73 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SrfQ9JM73 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SrfQ9JM73 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SrfQ9JM73 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SrfQ9JM73 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SrfQ9JM73 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SrfQ9JM73 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SrfQ9JM73 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.03■□□□□ 0.8
SrfQ9JM73 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.03■□□□□ 0.8
SrfQ9JM73 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SrfQ9JM73 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SrfQ9JM73 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.02■□□□□ 0.8
SrfQ9JM73 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.02■□□□□ 0.8
SrfQ9JM73 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SrfQ9JM73 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SrfQ9JM73 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SrfQ9JM73 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SrfQ9JM73 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.01■□□□□ 0.79
SrfQ9JM73 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.01■□□□□ 0.79
SrfQ9JM73 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SrfQ9JM73 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.01■□□□□ 0.79
SrfQ9JM73 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20■□□□□ 0.79
SrfQ9JM73 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SrfQ9JM73 Gm5576-201ENSMUST00000075809 1236 ntBASIC20■□□□□ 0.79
SrfQ9JM73 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20■□□□□ 0.79
SrfQ9JM73 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SrfQ9JM73 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20■□□□□ 0.79
SrfQ9JM73 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20■□□□□ 0.79
SrfQ9JM73 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Gm8493-201ENSMUST00000196881 489 ntBASIC19.99■□□□□ 0.79
SrfQ9JM73 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
SrfQ9JM73 Gm7143-201ENSMUST00000222811 859 ntBASIC19.99■□□□□ 0.79
SrfQ9JM73 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SrfQ9JM73 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SrfQ9JM73 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.98■□□□□ 0.79
SrfQ9JM73 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms