Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdc40Q9DC48 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.46■□□□□ 0.71
Cdc40Q9DC48 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdc40Q9DC48 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdc40Q9DC48 Gm15039-201ENSMUST00000118914 875 ntBASIC19.45■□□□□ 0.7
Cdc40Q9DC48 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdc40Q9DC48 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cdc40Q9DC48 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cdc40Q9DC48 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdc40Q9DC48 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Cdc40Q9DC48 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.43■□□□□ 0.7
Cdc40Q9DC48 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdc40Q9DC48 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdc40Q9DC48 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdc40Q9DC48 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cdc40Q9DC48 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdc40Q9DC48 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdc40Q9DC48 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdc40Q9DC48 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdc40Q9DC48 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdc40Q9DC48 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdc40Q9DC48 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdc40Q9DC48 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.39■□□□□ 0.7
Cdc40Q9DC48 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdc40Q9DC48 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdc40Q9DC48 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdc40Q9DC48 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdc40Q9DC48 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.38■□□□□ 0.69
Cdc40Q9DC48 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.38■□□□□ 0.69
Cdc40Q9DC48 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.38■□□□□ 0.69
Cdc40Q9DC48 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdc40Q9DC48 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdc40Q9DC48 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdc40Q9DC48 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.36■□□□□ 0.69
Cdc40Q9DC48 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdc40Q9DC48 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdc40Q9DC48 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdc40Q9DC48 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdc40Q9DC48 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.35■□□□□ 0.69
Cdc40Q9DC48 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdc40Q9DC48 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdc40Q9DC48 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdc40Q9DC48 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdc40Q9DC48 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.34■□□□□ 0.69
Cdc40Q9DC48 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdc40Q9DC48 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdc40Q9DC48 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdc40Q9DC48 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdc40Q9DC48 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.33■□□□□ 0.68
Cdc40Q9DC48 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.33■□□□□ 0.68
Cdc40Q9DC48 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms