Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Ndufa11Q9D8B4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa11Q9D8B4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa11Q9D8B4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ndufa11Q9D8B4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ndufa11Q9D8B4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ndufa11Q9D8B4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ndufa11Q9D8B4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa11Q9D8B4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa11Q9D8B4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.39■□□□□ 0.53
Ndufa11Q9D8B4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa11Q9D8B4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa11Q9D8B4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Gm5874-201ENSMUST00000096101 508 ntBASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa11Q9D8B4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ndufa11Q9D8B4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa11Q9D8B4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.35■□□□□ 0.53
Ndufa11Q9D8B4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufa11Q9D8B4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndufa11Q9D8B4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Ndufa11Q9D8B4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndufa11Q9D8B4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.33■□□□□ 0.52
Ndufa11Q9D8B4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.33■□□□□ 0.52
Ndufa11Q9D8B4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndufa11Q9D8B4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndufa11Q9D8B4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa11Q9D8B4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa11Q9D8B4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa11Q9D8B4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa11Q9D8B4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa11Q9D8B4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms