Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4aQ9D7V1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4aQ9D7V1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4aQ9D7V1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sh2d4aQ9D7V1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4aQ9D7V1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4aQ9D7V1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh2d4aQ9D7V1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4aQ9D7V1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Gm16437-201ENSMUST00000025669 507 ntBASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sh2d4aQ9D7V1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4aQ9D7V1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4aQ9D7V1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4aQ9D7V1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sh2d4aQ9D7V1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4aQ9D7V1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4aQ9D7V1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4aQ9D7V1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Gm11687-201ENSMUST00000118911 886 ntBASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sh2d4aQ9D7V1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh2d4aQ9D7V1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4aQ9D7V1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4aQ9D7V1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4aQ9D7V1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4aQ9D7V1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.15■□□□□ 0.82
Sh2d4aQ9D7V1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms