Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rita1Q9D1H0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rita1Q9D1H0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rita1Q9D1H0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rita1Q9D1H0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rita1Q9D1H0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rita1Q9D1H0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rita1Q9D1H0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rita1Q9D1H0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rita1Q9D1H0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rita1Q9D1H0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rita1Q9D1H0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.46■□□□□ 0.71
Rita1Q9D1H0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rita1Q9D1H0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.46■□□□□ 0.71
Rita1Q9D1H0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.46■□□□□ 0.71
Rita1Q9D1H0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rita1Q9D1H0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rita1Q9D1H0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rita1Q9D1H0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.43■□□□□ 0.7
Rita1Q9D1H0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rita1Q9D1H0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.43■□□□□ 0.7
Rita1Q9D1H0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rita1Q9D1H0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rita1Q9D1H0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rita1Q9D1H0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Rita1Q9D1H0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rita1Q9D1H0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.4■□□□□ 0.7
Rita1Q9D1H0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rita1Q9D1H0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rita1Q9D1H0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rita1Q9D1H0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rita1Q9D1H0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms