Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.64■□□□□ 0.73
Cthrc1Q9D1D6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cthrc1Q9D1D6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cthrc1Q9D1D6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cthrc1Q9D1D6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cthrc1Q9D1D6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Rps24-207ENSMUST00000224568 714 ntBASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.63■□□□□ 0.73
Cthrc1Q9D1D6 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.62■□□□□ 0.73
Cthrc1Q9D1D6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cthrc1Q9D1D6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Gm45102-201ENSMUST00000207427 857 ntBASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.6■□□□□ 0.73
Cthrc1Q9D1D6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cthrc1Q9D1D6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cthrc1Q9D1D6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.58■□□□□ 0.72
Cthrc1Q9D1D6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cthrc1Q9D1D6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cthrc1Q9D1D6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cthrc1Q9D1D6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cthrc1Q9D1D6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cthrc1Q9D1D6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cthrc1Q9D1D6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cthrc1Q9D1D6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Gm10232-201ENSMUST00000089221 720 ntBASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cthrc1Q9D1D6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cthrc1Q9D1D6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cthrc1Q9D1D6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cthrc1Q9D1D6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cthrc1Q9D1D6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Cthrc1Q9D1D6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cthrc1Q9D1D6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cthrc1Q9D1D6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cthrc1Q9D1D6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cthrc1Q9D1D6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cthrc1Q9D1D6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cthrc1Q9D1D6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cthrc1Q9D1D6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.52■□□□□ 0.71
Cthrc1Q9D1D6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms