Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
Upk1aQ9D132 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20■□□□□ 0.79
Upk1aQ9D132 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upk1aQ9D132 Iqck-206ENSMUST00000208658 2891 ntBASIC20■□□□□ 0.79
Upk1aQ9D132 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.99■□□□□ 0.79
Upk1aQ9D132 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Upk1aQ9D132 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.98■□□□□ 0.79
Upk1aQ9D132 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Upk1aQ9D132 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.98■□□□□ 0.79
Upk1aQ9D132 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk1aQ9D132 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk1aQ9D132 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.97■□□□□ 0.79
Upk1aQ9D132 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk1aQ9D132 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.97■□□□□ 0.79
Upk1aQ9D132 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk1aQ9D132 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk1aQ9D132 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Upk1aQ9D132 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk1aQ9D132 Golph3-202ENSMUST00000226517 2359 ntBASIC19.97■□□□□ 0.79
Upk1aQ9D132 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.96■□□□□ 0.79
Upk1aQ9D132 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk1aQ9D132 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.96■□□□□ 0.79
Upk1aQ9D132 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.96■□□□□ 0.79
Upk1aQ9D132 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk1aQ9D132 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Scarna2-201ENSMUST00000157560 414 ntBASIC19.95■□□□□ 0.78
Upk1aQ9D132 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Upk1aQ9D132 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Upk1aQ9D132 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.94■□□□□ 0.78
Upk1aQ9D132 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upk1aQ9D132 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upk1aQ9D132 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upk1aQ9D132 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Upk1aQ9D132 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Upk1aQ9D132 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk1aQ9D132 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.92■□□□□ 0.78
Upk1aQ9D132 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Upk1aQ9D132 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk1aQ9D132 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Gm16437-201ENSMUST00000025669 507 ntBASIC19.91■□□□□ 0.78
Upk1aQ9D132 Gm9806-201ENSMUST00000051080 552 ntBASIC19.91■□□□□ 0.78
Upk1aQ9D132 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk1aQ9D132 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms