Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Lysmd1Q9D0E3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Lysmd1Q9D0E3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lysmd1Q9D0E3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lysmd1Q9D0E3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lysmd1Q9D0E3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Lysmd1Q9D0E3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
Lysmd1Q9D0E3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lysmd1Q9D0E3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lysmd1Q9D0E3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.32■■□□□ 1.32
Lysmd1Q9D0E3 Gm40848-201ENSMUST00000221998 324 ntBASIC23.32■■□□□ 1.32
Lysmd1Q9D0E3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lysmd1Q9D0E3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lysmd1Q9D0E3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lysmd1Q9D0E3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lysmd1Q9D0E3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lysmd1Q9D0E3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lysmd1Q9D0E3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.28■■□□□ 1.32
Lysmd1Q9D0E3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Lysmd1Q9D0E3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Lysmd1Q9D0E3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lysmd1Q9D0E3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lysmd1Q9D0E3 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.25■■□□□ 1.31
Lysmd1Q9D0E3 Gm42778-201ENSMUST00000199644 553 ntBASIC23.25■■□□□ 1.31
Lysmd1Q9D0E3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lysmd1Q9D0E3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Gm12441-201ENSMUST00000121806 588 ntBASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Gm7143-201ENSMUST00000222811 859 ntBASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lysmd1Q9D0E3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lysmd1Q9D0E3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lysmd1Q9D0E3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lysmd1Q9D0E3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.22■■□□□ 1.31
Lysmd1Q9D0E3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.22■■□□□ 1.31
Lysmd1Q9D0E3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lysmd1Q9D0E3 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.2■■□□□ 1.3
Lysmd1Q9D0E3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lysmd1Q9D0E3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lysmd1Q9D0E3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lysmd1Q9D0E3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Lysmd1Q9D0E3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Gm20760-201ENSMUST00000179197 648 ntBASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms