Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.94■□□□□ 0.78
Otud1Q9CUB6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otud1Q9CUB6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otud1Q9CUB6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Otud1Q9CUB6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otud1Q9CUB6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Otud1Q9CUB6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Otud1Q9CUB6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Otud1Q9CUB6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.89■□□□□ 0.77
Otud1Q9CUB6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.89■□□□□ 0.77
Otud1Q9CUB6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Otud1Q9CUB6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Otud1Q9CUB6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.88■□□□□ 0.77
Otud1Q9CUB6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otud1Q9CUB6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otud1Q9CUB6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Gm22238-201ENSMUST00000175222 88 ntBASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Otud1Q9CUB6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otud1Q9CUB6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.83■□□□□ 0.77
Otud1Q9CUB6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.83■□□□□ 0.77
Otud1Q9CUB6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
Otud1Q9CUB6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Otud1Q9CUB6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Otud1Q9CUB6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Otud1Q9CUB6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms