Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col25a1Q99MQ5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col25a1Q99MQ5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col25a1Q99MQ5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col25a1Q99MQ5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col25a1Q99MQ5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col25a1Q99MQ5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Col25a1Q99MQ5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col25a1Q99MQ5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col25a1Q99MQ5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Col25a1Q99MQ5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col25a1Q99MQ5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col25a1Q99MQ5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col25a1Q99MQ5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Col25a1Q99MQ5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Col25a1Q99MQ5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col25a1Q99MQ5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Gm10602-201ENSMUST00000098239 609 ntBASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col25a1Q99MQ5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col25a1Q99MQ5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Col25a1Q99MQ5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col25a1Q99MQ5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col25a1Q99MQ5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.91■■□□□ 1.1
Col25a1Q99MQ5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Col25a1Q99MQ5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col25a1Q99MQ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col25a1Q99MQ5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col25a1Q99MQ5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col25a1Q99MQ5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col25a1Q99MQ5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.89■■□□□ 1.09
Col25a1Q99MQ5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Col25a1Q99MQ5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col25a1Q99MQ5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col25a1Q99MQ5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Col25a1Q99MQ5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col25a1Q99MQ5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.87■■□□□ 1.09
Col25a1Q99MQ5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col25a1Q99MQ5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col25a1Q99MQ5 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.86■■□□□ 1.09
Col25a1Q99MQ5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col25a1Q99MQ5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Col25a1Q99MQ5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col25a1Q99MQ5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col25a1Q99MQ5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms