Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nkd1Q99MH6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Gm27502-201ENSMUST00000183495 199 ntBASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkd1Q99MH6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd1Q99MH6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd1Q99MH6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd1Q99MH6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd1Q99MH6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd1Q99MH6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd1Q99MH6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd1Q99MH6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd1Q99MH6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nkd1Q99MH6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd1Q99MH6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.67■□□□□ 0.74
Nkd1Q99MH6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd1Q99MH6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd1Q99MH6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Gm14523-201ENSMUST00000117260 558 ntBASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd1Q99MH6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd1Q99MH6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nkd1Q99MH6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkd1Q99MH6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkd1Q99MH6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd1Q99MH6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd1Q99MH6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Nkd1Q99MH6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd1Q99MH6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms